Documents

CueMol2

Tutorial

• CueMol2 GUI tutorial (in Japanese)
  • Translation by Google

Manual

• Documents (translation of Japanese version by Google)

General topics

• Style
• Camera
• How to specify colors (color notations)

Opening/Saving files, etc.

• Open files
• Open scene files
• Open PyMOL session file
• Fetch PDB/density map from servers
• Save files
• Save scene files
• Options for saveing Scene

GUI elements

• Scene panel
  • Renderer group
  • Copy-and-paste of Objects and Renderers
• Log display panel
• Sequence display panel

Representations (renderers)

• Common renderer settings
• Renderers for molecules
  • Space-filling representation (cpk renderer)
  • Ball&stick representation (ballstick renderer)
  • Cartoon representation (cartoon renderer)

Rendering to image files

• POV-Ray rendering
  • POV-Ray rendering dialog
  • Rendering of semi-transparent objects
  • About Material
  • Toon rendering
  • Rendering of scenes with a sense of depth using Radiosity method
  • About Lighting and Radiosity method
• Other rendering topics
  • Exporting to PNG images
  • Exporting to POV files (without rendering)

CueMol 1.1

Tutorial

• CueMol1.1 GUI tutorial (in Japanese)
  • Translation by Google
• QScript tutorial (in Japanese)
  • Translation by Excite

Manual

Reference

• Translation by Google